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vtk-dicom
0.8.17
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Generate DICOM data objects for MR images. More...
#include <vtkDICOMMRGenerator.h>
Public Types | |
| typedef vtkDICOMGenerator | Superclass |
 Public Types inherited from vtkDICOMGenerator | |
| typedef vtkObject | Superclass |
Public Member Functions | |
| virtual vtkTypeBool | IsA (const char *type) |
| vtkDICOMMRGenerator * | NewInstance () const |
| void | PrintSelf (ostream &os, vtkIndent indent) VTK_DICOM_OVERRIDE |
| Print information about this object. | |
| bool | GenerateInstance (vtkInformation *info) VTK_DICOM_OVERRIDE |
| Generate an instance of one of the supported classes. More... | |
| Public Member Functions inherited from vtkDICOMGenerator | |
| vtkDICOMGenerator * | NewInstance () const |
| vtkDICOMMetaData * | GetMetaData () |
| Get the generated meta data. More... | |
| virtual void | SetExtended (int) |
| Copy extended attributes from source (default: Off). More... | |
| virtual void | ExtendedOn () |
| virtual void | ExtendedOff () |
| virtual int | GetExtended () |
| virtual void | SetMultiFrame (int) |
| Create a multi-frame object (default: Off). More... | |
| virtual void | MultiFrameOn () |
| virtual void | MultiFrameOff () |
| virtual int | GetMultiFrame () |
| virtual void | SetTimeAsVector (int) |
| Write scalar components as the time dimension (default: Off). More... | |
| virtual void | TimeAsVectorOn () |
| virtual void | TimeAsVectorOff () |
| virtual int | GetTimeAsVector () |
| virtual void | SetTimeDimension (int) |
| Set the time dimension to use in the DICOM file (or zero if none). More... | |
| virtual int | GetTimeDimension () |
| virtual void | SetTimeSpacing (double) |
| virtual double | GetTimeSpacing () |
| virtual void | SetRescaleIntercept (double) |
| Set the rescaling parameters, for example for CT. More... | |
| virtual double | GetRescaleIntercept () |
| virtual void | SetRescaleSlope (double) |
| virtual double | GetRescaleSlope () |
| virtual void | SetNumberOfOverlays (int) |
| Set the number of overlays to generate. More... | |
| virtual int | GetNumberOfOverlays () |
| void | SetPatientMatrix (vtkMatrix4x4 *) |
| Set the matrix that places the image in DICOM patient coords. More... | |
| vtkMatrix4x4 * | GetPatientMatrix () |
| virtual void | SetOriginAtBottom (int) |
| Let the generator know how the image is arranged in memory. More... | |
| virtual int | GetOriginAtBottom () |
| virtual void | SetReverseSliceOrder (int) |
| Let the generator know how to order the slices. More... | |
| virtual int | GetReverseSliceOrder () |
| void | SetSourceMetaData (vtkDICOMMetaData *) |
| Set some meta data for the constructor to use as a source. More... | |
| vtkDICOMMetaData * | GetSourceMetaData () |
| void | SetUIDGenerator (vtkDICOMUIDGenerator *) |
| Set the UID generator, for generating unique IDs. More... | |
| vtkDICOMUIDGenerator * | GetUIDGenerator () |
| vtkIntArray * | GetSliceIndexArray () |
| Get an array that maps file and frame to slice. More... | |
| vtkIntArray * | GetComponentIndexArray () |
| Get an array that maps file and frame to component. More... | |
| Public Member Functions inherited from vtkObject | |
| vtkBaseTypeMacro (vtkObject, vtkObjectBase) | |
| virtual void | DebugOn () |
| virtual void | DebugOff () |
| bool | GetDebug () |
| void | SetDebug (bool debugFlag) |
| virtual void | Modified () |
| virtual vtkMTimeType | GetMTime () |
| void | PrintSelf (ostream &os, vtkIndent indent) VTK_OVERRIDE |
| unsigned long | AddObserver (unsigned long event, vtkCommand *, float priority=0.0f) |
| unsigned long | AddObserver (const char *event, vtkCommand *, float priority=0.0f) |
| vtkCommand * | GetCommand (unsigned long tag) |
| void | RemoveObserver (vtkCommand *) |
| void | RemoveObservers (unsigned long event, vtkCommand *) |
| void | RemoveObservers (const char *event, vtkCommand *) |
| int | HasObserver (unsigned long event, vtkCommand *) |
| int | HasObserver (const char *event, vtkCommand *) |
| void | RemoveObserver (unsigned long tag) |
| void | RemoveObservers (unsigned long event) |
| void | RemoveObservers (const char *event) |
| void | RemoveAllObservers () |
| int | HasObserver (unsigned long event) |
| int | HasObserver (const char *event) |
| template<class U , class T > | |
| unsigned long | AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f) |
| template<class U , class T > | |
| unsigned long | AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) |
| template<class U , class T > | |
| unsigned long | AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) |
| int | InvokeEvent (unsigned long event, void *callData) |
| int | InvokeEvent (const char *event, void *callData) |
| int | InvokeEvent (unsigned long event) |
| int | InvokeEvent (const char *event) |
| Public Member Functions inherited from vtkObjectBase | |
| const char * | GetClassName () const |
| virtual void | Delete () |
| virtual void | FastDelete () |
| void | InitializeObjectBase () |
| void | Print (ostream &os) |
| virtual void | PrintHeader (ostream &os, vtkIndent indent) |
| virtual void | PrintTrailer (ostream &os, vtkIndent indent) |
| virtual void | Register (vtkObjectBase *o) |
| virtual void | UnRegister (vtkObjectBase *o) |
| int | GetReferenceCount () |
| void | SetReferenceCount (int) |
| void | PrintRevisions (ostream &) |
Static Public Member Functions | |
| static vtkDICOMMRGenerator * | New () |
| Static method for construction. | |
| static vtkTypeBool | IsTypeOf (const char *type) |
| static vtkDICOMMRGenerator * | SafeDownCast (vtkObjectBase *o) |
| Static Public Member Functions inherited from vtkDICOMGenerator | |
| static vtkDICOMGenerator * | New () |
| Static method for construction. | |
| static vtkTypeBool | IsTypeOf (const char *type) |
| static vtkDICOMGenerator * | SafeDownCast (vtkObjectBase *o) |
| Static Public Member Functions inherited from vtkObject | |
| static vtkObject * | New () |
| static void | BreakOnError () |
| static void | SetGlobalWarningDisplay (int val) |
| static void | GlobalWarningDisplayOn () |
| static void | GlobalWarningDisplayOff () |
| static int | GetGlobalWarningDisplay () |
| Static Public Member Functions inherited from vtkObjectBase | |
| static vtkTypeBool | IsTypeOf (const char *name) |
| static vtkObjectBase * | New () |
Protected Member Functions | |
| virtual vtkObjectBase * | NewInstanceInternal () const |
| virtual bool | GenerateMRSeriesModule (vtkDICOMMetaData *source) |
| Generate the Series Module. | |
| virtual bool | GenerateMRImageModule (vtkDICOMMetaData *source) |
| Generate the Image Module. | |
| virtual bool | GenerateMRInstance (vtkInformation *info) |
| Instantiate a DICOM Secondary Capture Image object. | |
| Protected Member Functions inherited from vtkDICOMGenerator | |
| vtkDICOMGenerator () | |
| Protected constructor method. | |
| std::string | GenerateUID (vtkDICOMTag tag) |
| Generate a UID for the provided tag. | |
| void | GenerateUIDs (vtkDICOMTag tag, vtkStringArray *uids) |
| Generate a series of UIDs, sorted from low to high. More... | |
| void | SetPixelRestrictions (unsigned int pixelRepresentation, unsigned int bitsStored, int colorComponents) |
| Used by subclasses to place restrictions on the pixel type. | |
| virtual bool | GenerateSOPCommonModule (vtkDICOMMetaData *meta, const char *SOPClass) |
| Generate the DICOM SOP Common Module. | |
| virtual bool | GeneratePatientModule (vtkDICOMMetaData *source) |
| Generate the DICOM Patient Module. | |
| virtual bool | GenerateClinicalTrialSubjectModule (vtkDICOMMetaData *source) |
| Generate the DICOM Clinical Trial Subject Module. | |
| virtual bool | GenerateGeneralStudyModule (vtkDICOMMetaData *source) |
| Generate the DICOM General Study Module. | |
| virtual bool | GeneratePatientStudyModule (vtkDICOMMetaData *source) |
| Generate the DICOM Patient Study Module. | |
| virtual bool | GenerateClinicalTrialStudyModule (vtkDICOMMetaData *source) |
| Generate the DICOM Clinical Trial Study Module. | |
| virtual bool | GenerateGeneralSeriesModule (vtkDICOMMetaData *source) |
| Generate the DICOM Series Module. | |
| virtual bool | GenerateClinicalTrialSeriesModule (vtkDICOMMetaData *source) |
| Generate the DICOM Clinical Trial Series Module. | |
| virtual bool | GenerateFrameOfReferenceModule (vtkDICOMMetaData *source) |
| Generate the DICOM Frame of Reference Module. | |
| virtual bool | GenerateGeneralEquipmentModule (vtkDICOMMetaData *source) |
| Generate the DICOM Equipment Module. | |
| virtual bool | GenerateGeneralImageModule (vtkDICOMMetaData *source) |
| Generate the DICOM Image Module. | |
| virtual bool | GenerateImagePlaneModule (vtkDICOMMetaData *source) |
| Generate the DICOM Plane Module. | |
| virtual bool | GenerateImagePixelModule (vtkDICOMMetaData *source) |
| Generate the DICOM Pixel Module. | |
| virtual bool | GenerateContrastBolusModule (vtkDICOMMetaData *source) |
| Generate The DICOM Contrast/Bolus Module. | |
| virtual bool | GenerateMultiFrameModule (vtkDICOMMetaData *source) |
| Generate The DICOM Multi-frame Module. | |
| virtual bool | GenerateDeviceModule (vtkDICOMMetaData *source) |
| Generate The DICOM Device Module. | |
| virtual bool | GenerateSpecimenModule (vtkDICOMMetaData *source) |
| Generate The DICOM Specimen Module. | |
| virtual bool | GenerateOverlayPlaneModule (vtkDICOMMetaData *source) |
| Generate the DICOM Overlay Plane Module. | |
| virtual bool | GenerateVOILUTModule (vtkDICOMMetaData *source) |
| Generate the DICOM VOI LUT Module. | |
| virtual bool | CopyRequiredAttributes (const DC::EnumType *tags, vtkDICOMMetaData *source) |
| Copy required attributes into the meta data. More... | |
| virtual bool | CopyOptionalAttributes (const DC::EnumType *tags, vtkDICOMMetaData *source) |
| Copy optional attributes into the meta data. More... | |
| virtual bool | CopyAttributes (const DC::EnumType *blacklist, vtkDICOMMetaData *source) |
| Copy all attributes into the meta data, excluding blacklisted ones. More... | |
| void | ComputeAdjustedMatrix (double matrix[16], double origin[3], double spacing[3]) |
| Compute the matrix, needed for Position and Orientation. | |
| virtual void | ComputeDimensions (vtkInformation *info, int *nframes, int dims[5], double spacing[5], double origin[5]) |
| Compute the dimensions. More... | |
| virtual void | ComputePixelValueRange (vtkInformation *info, int seriesRange[2]) |
| Compute the range of the data. More... | |
| virtual void | MatchInstances (vtkDICOMMetaData *source) |
| Attempt to match each slice to a source meta data slice. | |
| virtual void | InitializeMetaData (vtkInformation *info) |
| Initialize the meta data and compute the slice index array. More... | |
| Protected Member Functions inherited from vtkObject | |
| void | RegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE |
| void | UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE |
| void | InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL) |
| void | InternalReleaseFocus () |
| Protected Member Functions inherited from vtkObjectBase | |
| virtual void | CollectRevisions (ostream &) |
| virtual void | ReportReferences (vtkGarbageCollector *) |
| vtkObjectBase (const vtkObjectBase &) | |
| void | operator= (const vtkObjectBase &) |
Additional Inherited Members | |
| Protected Types inherited from vtkDICOMGenerator | |
| enum | { RepresentationUnsigned = 1u , RepresentationSigned = 2u , BitsStored1 = 1u , BitsStored6 = (1u << 5) , BitsStored8 = (1u << 7) , BitsStored10 = (1u << 9) , BitsStored12 = (1u << 11) , BitsStored16 = (1u << 15) , BitsStored32 = (1u << 31) } |
| Enumerated values for restricting pixel values. | |
| Static Protected Member Functions inherited from vtkDICOMGenerator | |
| static void | ComputeAspectRatio (const double spacing[2], int aspect[2]) |
| Compute aspect ratio from spacing. | |
| static void | ComputePositionAndOrientation (const double origin[3], const double matrix[16], double position[3], double orientation[6]) |
| Compute the position and orientation for a slice. More... | |
| Protected Attributes inherited from vtkDICOMGenerator | |
| vtkDICOMMetaData * | MetaData |
| The generated meta data. | |
| vtkDICOMMetaData * | SourceMetaData |
| The source meta data. | |
| vtkDICOMUIDGenerator * | UIDGenerator |
| The UID generator. | |
| int | Extended |
| Whether to copy attributes that aren't in the base SOP class. | |
| int | MultiFrame |
| Whether to prefer multi-frame files over single-frame. | |
| int | OriginAtBottom |
| Whether VTK image data is not top-to-bottom yet. | |
| int | ReverseSliceOrder |
| Whether to reverse the slices as compared to input data. | |
| int | TimeAsVector |
| Whether time is stored in slices or in scalar components. | |
| int | TimeDimension |
| Time dimension suggested by the writer. | |
| double | TimeSpacing |
| double | RescaleIntercept |
| Data rescaling parameters. | |
| double | RescaleSlope |
| int | NumberOfOverlays |
| The number of overlays to generate. | |
| int | ScalarType |
| The VTK scalar type of the data, set by InitializeMetaData(). | |
| int | NumberOfColorComponents |
| The number of color components, for color scalars. More... | |
| unsigned int | AllowedPixelRepresentation |
| The permitted pixel representation and bits stored, as bitfields. | |
| unsigned int | AllowedBitsStored |
| int | NumberOfFrames |
| The number of frames. More... | |
| int | Dimensions [5] |
| The actual dimensions to write to the file. More... | |
| double | Spacing [5] |
| double | Origin [5] |
| int | PixelValueRange [2] |
| The smallest and largest pixel values in the image data. More... | |
| vtkMatrix4x4 * | PatientMatrix |
| The orientation matrix for the DICOM file. | |
| vtkIntArray * | SliceIndexArray |
| The file-and-frame to slice-and-component maps. | |
| vtkIntArray * | ComponentIndexArray |
| vtkIntArray * | SourceInstanceArray |
| Map from output files to input files. | |
| vtkIntArray * | RangeArray |
| Map from frame to image min/max. | |
| Protected Attributes inherited from vtkObject | |
| bool | Debug |
| vtkTimeStamp | MTime |
| vtkSubjectHelper * | SubjectHelper |
| Protected Attributes inherited from vtkObjectBase | |
| vtkAtomicInt32 | ReferenceCount |
| vtkWeakPointerBase ** | WeakPointers |
Generate DICOM data objects for MR images.
Generate a DICOM data set belonging to one of the MR SOP classes. The assumption is that images have been read into VTK as MR, and are being written out as derived images after being processed. The specific IOD classes supported are as follows:
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virtual |
Generate an instance of one of the supported classes.
This is the primary interface method of this class. Given the information for a vtkImageData object, it will populate the attributes of the supplied vtkDICOMMetaData object.
Reimplemented from vtkDICOMGenerator.
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virtual |
Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.
Reimplemented from vtkDICOMGenerator.
1.9.1
