vtk-dicom  0.8.14
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | List of all members
vtkDICOMAlgorithm Class Reference

Superclass for DICOM image filters. More...

#include <vtkDICOMAlgorithm.h>

Inheritance diagram for vtkDICOMAlgorithm:
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Collaboration diagram for vtkDICOMAlgorithm:
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Public Types

typedef vtkThreadedImageAlgorithm Superclass
 
- Public Types inherited from vtkThreadedImageAlgorithm
typedef vtkImageAlgorithm Superclass
 
- Public Types inherited from vtkImageAlgorithm
typedef vtkAlgorithm Superclass
 
- Public Types inherited from vtkAlgorithm
enum  DesiredOutputPrecision { SINGLE_PRECISION , DOUBLE_PRECISION , DEFAULT_PRECISION }
 
typedef vtkObject Superclass
 

Public Member Functions

virtual vtkTypeBool IsA (const char *type)
 
vtkDICOMAlgorithmNewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) VTK_DICOM_OVERRIDE
 Print information about this object.
 
- Public Member Functions inherited from vtkThreadedImageAlgorithm
vtkThreadedImageAlgorithmNewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) VTK_OVERRIDE
 
virtual void ThreadedExecute (vtkImageData *inData, vtkImageData *outData, int extent[6], int threadId)
 
virtual bool GetEnableSMP ()
 
virtual void SetEnableSMP (bool)
 
virtual void SetMinimumPieceSize (int, int, int)
 
virtual void SetMinimumPieceSize (int[3])
 
virtual int * GetMinimumPieceSize ()
 
virtual void GetMinimumPieceSize (int &, int &, int &)
 
virtual void GetMinimumPieceSize (int[3])
 
virtual void SetDesiredBytesPerPiece (vtkIdType)
 
virtual vtkIdType GetDesiredBytesPerPiece ()
 
virtual void SetSplitMode (int)
 
void SetSplitModeToSlab ()
 
void SetSplitModeToBeam ()
 
void SetSplitModeToBlock ()
 
virtual int GetSplitMode ()
 
virtual void SetNumberOfThreads (int)
 
virtual int GetNumberOfThreads ()
 
virtual int SplitExtent (int splitExt[6], int startExt[6], int num, int total)
 
- Public Member Functions inherited from vtkImageAlgorithm
vtkImageAlgorithmNewInstance () const
 
vtkImageData * GetOutput ()
 
vtkImageData * GetOutput (int)
 
virtual void SetOutput (vtkDataObject *d)
 
int ProcessRequest (vtkInformation *, vtkInformationVector **, vtkInformationVector *) VTK_OVERRIDE
 
void SetInputData (vtkDataObject *)
 
void SetInputData (int, vtkDataObject *)
 
vtkDataObject * GetInput (int port)
 
vtkDataObject * GetInput ()
 
vtkImageData * GetImageDataInput (int port)
 
virtual void AddInputData (vtkDataObject *)
 
virtual void AddInputData (int, vtkDataObject *)
 
- Public Member Functions inherited from vtkAlgorithm
vtkAlgorithmNewInstance () const
 
int HasExecutive ()
 
vtkExecutive * GetExecutive ()
 
virtual void SetExecutive (vtkExecutive *executive)
 
int ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
 
virtual int ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
 
virtual int ModifyRequest (vtkInformation *request, int when)
 
vtkInformation * GetInputPortInformation (int port)
 
vtkInformation * GetOutputPortInformation (int port)
 
virtual vtkInformation * GetInformation ()
 
virtual void SetInformation (vtkInformation *)
 
int GetNumberOfInputPorts ()
 
int GetNumberOfOutputPorts ()
 
void Register (vtkObjectBase *o) VTK_OVERRIDE
 
void UnRegister (vtkObjectBase *o) VTK_OVERRIDE
 
virtual void SetAbortExecute (int)
 
virtual int GetAbortExecute ()
 
virtual void AbortExecuteOn ()
 
virtual void AbortExecuteOff ()
 
virtual void SetProgress (double)
 
virtual double GetProgress ()
 
void UpdateProgress (double amount)
 
void SetProgressText (const char *ptext)
 
virtual char * GetProgressText ()
 
virtual unsigned long GetErrorCode ()
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
 
virtual void SetInputArrayToProcess (int idx, vtkInformation *info)
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
 
vtkInformation * GetInputArrayInformation (int idx)
 
void RemoveAllInputs ()
 
vtkDataObject * GetOutputDataObject (int port)
 
vtkDataObject * GetInputDataObject (int port, int connection)
 
virtual void SetInputConnection (int port, vtkAlgorithmOutput *input)
 
virtual void SetInputConnection (vtkAlgorithmOutput *input)
 
virtual void AddInputConnection (int port, vtkAlgorithmOutput *input)
 
virtual void AddInputConnection (vtkAlgorithmOutput *input)
 
virtual void RemoveInputConnection (int port, vtkAlgorithmOutput *input)
 
virtual void RemoveInputConnection (int port, int idx)
 
virtual void RemoveAllInputConnections (int port)
 
virtual void SetInputDataObject (int port, vtkDataObject *data)
 
virtual void SetInputDataObject (vtkDataObject *data)
 
virtual void AddInputDataObject (int port, vtkDataObject *data)
 
virtual void AddInputDataObject (vtkDataObject *data)
 
vtkAlgorithmOutput * GetOutputPort (int index)
 
vtkAlgorithmOutput * GetOutputPort ()
 
int GetNumberOfInputConnections (int port)
 
int GetTotalNumberOfInputConnections ()
 
vtkAlgorithmOutput * GetInputConnection (int port, int index)
 
vtkAlgorithmGetInputAlgorithm (int port, int index, int &algPort)
 
vtkAlgorithmGetInputAlgorithm (int port, int index)
 
vtkAlgorithmGetInputAlgorithm ()
 
vtkExecutive * GetInputExecutive (int port, int index)
 
vtkExecutive * GetInputExecutive ()
 
vtkInformation * GetInputInformation (int port, int index)
 
vtkInformation * GetInputInformation ()
 
vtkInformation * GetOutputInformation (int port)
 
virtual void Update (int port)
 
virtual void Update ()
 
virtual int Update (int port, vtkInformationVector *requests)
 
virtual int Update (vtkInformation *requests)
 
virtual int UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=0)
 
virtual int UpdateExtent (const int extents[6])
 
virtual int UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=0)
 
virtual void UpdateInformation ()
 
virtual void UpdateDataObject ()
 
virtual void PropagateUpdateExtent ()
 
virtual void UpdateWholeExtent ()
 
void ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
 
virtual void SetReleaseDataFlag (int)
 
virtual int GetReleaseDataFlag ()
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
int UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
 
int UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
 
int SetUpdateExtentToWholeExtent (int port)
 
int SetUpdateExtentToWholeExtent ()
 
void SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)
 
void SetUpdateExtent (int piece, int numPieces, int ghostLevel)
 
void SetUpdateExtent (int port, int extent[6])
 
void SetUpdateExtent (int extent[6])
 
int * GetUpdateExtent ()
 
int * GetUpdateExtent (int port)
 
void GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
 
void GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
 
void GetUpdateExtent (int extent[6])
 
void GetUpdateExtent (int port, int extent[6])
 
int GetUpdatePiece ()
 
int GetUpdatePiece (int port)
 
int GetUpdateNumberOfPieces ()
 
int GetUpdateNumberOfPieces (int port)
 
int GetUpdateGhostLevel ()
 
int GetUpdateGhostLevel (int port)
 
void SetProgressObserver (vtkProgressObserver *)
 
virtual vtkProgressObserver * GetProgressObserver ()
 
- Public Member Functions inherited from vtkObject
 vtkBaseTypeMacro (vtkObject, vtkObjectBase)
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
bool GetDebug ()
 
void SetDebug (bool debugFlag)
 
virtual void Modified ()
 
virtual vtkMTimeType GetMTime ()
 
unsigned long AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
 
unsigned long AddObserver (const char *event, vtkCommand *, float priority=0.0f)
 
vtkCommand * GetCommand (unsigned long tag)
 
void RemoveObserver (vtkCommand *)
 
void RemoveObservers (unsigned long event, vtkCommand *)
 
void RemoveObservers (const char *event, vtkCommand *)
 
int HasObserver (unsigned long event, vtkCommand *)
 
int HasObserver (const char *event, vtkCommand *)
 
void RemoveObserver (unsigned long tag)
 
void RemoveObservers (unsigned long event)
 
void RemoveObservers (const char *event)
 
void RemoveAllObservers ()
 
int HasObserver (unsigned long event)
 
int HasObserver (const char *event)
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 
int InvokeEvent (unsigned long event, void *callData)
 
int InvokeEvent (const char *event, void *callData)
 
int InvokeEvent (unsigned long event)
 
int InvokeEvent (const char *event)
 
- Public Member Functions inherited from vtkObjectBase
const char * GetClassName () const
 
virtual void Delete ()
 
virtual void FastDelete ()
 
void InitializeObjectBase ()
 
void Print (ostream &os)
 
virtual void PrintHeader (ostream &os, vtkIndent indent)
 
virtual void PrintTrailer (ostream &os, vtkIndent indent)
 
int GetReferenceCount ()
 
void SetReferenceCount (int)
 
void PrintRevisions (ostream &)
 

Static Public Member Functions

static vtkTypeBool IsTypeOf (const char *type)
 
static vtkDICOMAlgorithmSafeDownCast (vtkObjectBase *o)
 
static vtkDICOMAlgorithmNew ()
 Static method for construction.
 
static vtkInformationDataObjectKey * META_DATA ()
 The information key for the meta data.
 
static vtkInformationDoubleVectorKey * PATIENT_MATRIX ()
 A key to get the patient matrix from the VTK pipeline.
 
- Static Public Member Functions inherited from vtkThreadedImageAlgorithm
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkThreadedImageAlgorithmSafeDownCast (vtkObjectBase *o)
 
static void SetGlobalDefaultEnableSMP (bool enable)
 
static bool GetGlobalDefaultEnableSMP ()
 
- Static Public Member Functions inherited from vtkImageAlgorithm
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkImageAlgorithmSafeDownCast (vtkObjectBase *o)
 
- Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithmNew ()
 
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkAlgorithmSafeDownCast (vtkObjectBase *o)
 
static vtkInformationIntegerKey * INPUT_IS_OPTIONAL ()
 
static vtkInformationIntegerKey * INPUT_IS_REPEATABLE ()
 
static vtkInformationInformationVectorKey * INPUT_REQUIRED_FIELDS ()
 
static vtkInformationStringVectorKey * INPUT_REQUIRED_DATA_TYPE ()
 
static vtkInformationInformationVectorKey * INPUT_ARRAYS_TO_PROCESS ()
 
static vtkInformationIntegerKey * INPUT_PORT ()
 
static vtkInformationIntegerKey * INPUT_CONNECTION ()
 
static vtkInformationIntegerKey * CAN_PRODUCE_SUB_EXTENT ()
 
static vtkInformationIntegerKey * CAN_HANDLE_PIECE_REQUEST ()
 
static void SetDefaultExecutivePrototype (vtkExecutive *proto)
 
- Static Public Member Functions inherited from vtkObject
static vtkObjectNew ()
 
static void BreakOnError ()
 
static void SetGlobalWarningDisplay (int val)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static int GetGlobalWarningDisplay ()
 
- Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool IsTypeOf (const char *name)
 
static vtkObjectBaseNew ()
 

Protected Member Functions

virtual vtkObjectBaseNewInstanceInternal () const
 
vtkInformation * GetMetaDataInformation (vtkInformationVector **inputVector, int inputPort, int inputConnection)
 Get the information object that holds the meta data for the given input.
 
virtual void CopyMetaDataToOutputInformation (vtkInformationVector **inputVector, int inputPort, int inputConnection, vtkInformationVector *outputVector, int outputPort)
 Copy the meta data from an input connection to an output port. More...
 
virtual void CopyMetaDataToOutputData (vtkInformation *outInfo, vtkDataObject *outData)
 Copy the meta data from the output information to the output data. More...
 
int RequestInformation (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) VTK_DICOM_OVERRIDE
 
int RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) VTK_DICOM_OVERRIDE
 
void ThreadedRequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector, vtkImageData ***inData, vtkImageData **outData, int ext[6], int id) VTK_DICOM_OVERRIDE
 
- Protected Member Functions inherited from vtkThreadedImageAlgorithm
int RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) VTK_OVERRIDE
 
virtual void SMPRequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector, vtkImageData ***inData, vtkImageData **outData, vtkIdType begin, vtkIdType end, vtkIdType pieces, int extent[6])
 
virtual void PrepareImageData (vtkInformationVector **inputVector, vtkInformationVector *outputVector, vtkImageData ***inDataObjects=0, vtkImageData **outDataObjects=0)
 
- Protected Member Functions inherited from vtkImageAlgorithm
virtual int RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
 
virtual void CopyInputArrayAttributesToOutput (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
 
virtual void ExecuteDataWithInformation (vtkDataObject *output, vtkInformation *outInfo)
 
virtual void ExecuteData (vtkDataObject *output)
 
virtual void Execute ()
 
virtual void AllocateOutputData (vtkImageData *out, vtkInformation *outInfo, int *uExtent)
 
virtual vtkImageData * AllocateOutputData (vtkDataObject *out, vtkInformation *outInfo)
 
virtual void CopyAttributeData (vtkImageData *in, vtkImageData *out, vtkInformationVector **inputVector)
 
int FillOutputPortInformation (int port, vtkInformation *info) VTK_OVERRIDE
 
int FillInputPortInformation (int port, vtkInformation *info) VTK_OVERRIDE
 
- Protected Member Functions inherited from vtkAlgorithm
virtual void SetNumberOfInputPorts (int n)
 
virtual void SetNumberOfOutputPorts (int n)
 
int InputPortIndexInRange (int index, const char *action)
 
int OutputPortIndexInRange (int index, const char *action)
 
int GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
 
int GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
 
int GetInputArrayAssociation (int idx, vtkDataObject *input)
 
vtkDataArray * GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
 
vtkDataArray * GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
 
vtkDataArray * GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
 
vtkDataArray * GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
 
vtkDataArray * GetInputArrayToProcess (int idx, vtkDataObject *input)
 
vtkDataArray * GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
 
vtkAbstractArray * GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
 
vtkInformation * GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
 
virtual vtkExecutive * CreateDefaultExecutive ()
 
virtual void SetErrorCode (unsigned long)
 
void ReportReferences (vtkGarbageCollector *) VTK_OVERRIDE
 
virtual void SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
 
virtual void SetNumberOfInputConnections (int port, int n)
 
void SetInputDataInternal (int port, vtkDataObject *input)
 
void AddInputDataInternal (int port, vtkDataObject *input)
 
- Protected Member Functions inherited from vtkObject
void RegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE
 
void UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE
 
void InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
 
void InternalReleaseFocus ()
 
- Protected Member Functions inherited from vtkObjectBase
virtual void CollectRevisions (ostream &)
 
 vtkObjectBase (const vtkObjectBase &)
 
void operator= (const vtkObjectBase &)
 

Additional Inherited Members

- Public Attributes inherited from vtkAlgorithm
int AbortExecute
 
- Protected Types inherited from vtkThreadedImageAlgorithm
enum  SplitModeEnum { SLAB = 0 , BEAM = 1 , BLOCK = 2 }
 
- Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey * PORT_REQUIREMENTS_FILLED ()
 
- Protected Attributes inherited from vtkThreadedImageAlgorithm
vtkMultiThreader * Threader
 
int NumberOfThreads
 
bool EnableSMP
 
int SplitMode
 
int SplitPath [3]
 
int SplitPathLength
 
int MinimumPieceSize [3]
 
vtkIdType DesiredBytesPerPiece
 
- Protected Attributes inherited from vtkAlgorithm
vtkInformation * Information
 
unsigned long ErrorCode
 
double Progress
 
char * ProgressText
 
vtkProgressObserver * ProgressObserver
 
- Protected Attributes inherited from vtkObject
bool Debug
 
vtkTimeStamp MTime
 
vtkSubjectHelper * SubjectHelper
 
- Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32 ReferenceCount
 
vtkWeakPointerBase ** WeakPointers
 
- Static Protected Attributes inherited from vtkThreadedImageAlgorithm
static bool GlobalDefaultEnableSMP
 
- Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive * DefaultExecutivePrototype
 

Detailed Description

Superclass for DICOM image filters.

This class allows the DICOM meta data to be carried by the VTK pipeline. Subclasses should always call Superclass::RequestInformation() and Superclass::RequestData within their own RequestInformation and RequestData methods.

Member Function Documentation

◆ CopyMetaDataToOutputData()

virtual void vtkDICOMAlgorithm::CopyMetaDataToOutputData ( vtkInformation *  outInfo,
vtkDataObject *  outData 
)
protectedvirtual

Copy the meta data from the output information to the output data.

This is called by RequestData.

◆ CopyMetaDataToOutputInformation()

virtual void vtkDICOMAlgorithm::CopyMetaDataToOutputInformation ( vtkInformationVector **  inputVector,
int  inputPort,
int  inputConnection,
vtkInformationVector *  outputVector,
int  outputPort 
)
protectedvirtual

Copy the meta data from an input connection to an output port.

This is called by RequestInformation. To copy the meta data to all output ports, use "-1" as the output port.

◆ IsA()

virtual vtkTypeBool vtkDICOMAlgorithm::IsA ( const char *  name)
virtual

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkThreadedImageAlgorithm.

Reimplemented in vtkDICOMCTRectifier, vtkDICOMApplyRescale, and vtkDICOMApplyPalette.

◆ RequestData()

int vtkDICOMAlgorithm::RequestData ( vtkInformation *  request,
vtkInformationVector **  inputVector,
vtkInformationVector *  outputVector 
)
protectedvirtual

This is called in response to a REQUEST_DATA request from the executive. Subclasses should override either this method or the ExecuteDataWithInformation method in order to generate data for their outputs. For images, the output arrays will already be allocated, so all that is necessary is to fill in the voxel values.

Reimplemented from vtkImageAlgorithm.

Reimplemented in vtkDICOMCTRectifier, vtkDICOMApplyRescale, and vtkDICOMApplyPalette.

◆ RequestInformation()

int vtkDICOMAlgorithm::RequestInformation ( vtkInformation *  request,
vtkInformationVector **  inputVector,
vtkInformationVector *  outputVector 
)
protectedvirtual

Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.

Reimplemented from vtkImageAlgorithm.

Reimplemented in vtkDICOMCTRectifier, vtkDICOMApplyRescale, and vtkDICOMApplyPalette.

◆ ThreadedRequestData()

void vtkDICOMAlgorithm::ThreadedRequestData ( vtkInformation *  request,
vtkInformationVector **  inputVector,
vtkInformationVector *  outputVector,
vtkImageData ***  inData,
vtkImageData **  outData,
int  extent[6],
int  threadId 
)
protectedvirtual

If the subclass does not define an Execute method, then the task will be broken up, multiple threads will be spawned, and each thread will call this method. It is public so that the thread functions can call this method.

Reimplemented from vtkThreadedImageAlgorithm.

Reimplemented in vtkDICOMCTRectifier, vtkDICOMApplyRescale, and vtkDICOMApplyPalette.


The documentation for this class was generated from the following file: